MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Actinomyces bowdenii
WMus004.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 457
bases: 3,191,231 bps
CDS: 2,590
rRNA: 3
Repeat region:
tmRNA: 1
tRNA: 56
misc RNA:
Total features: 2,650
Total number of protein coding genes annotated/found:
2,590
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Items 1 - 20
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range
Gene Product Name
SEQF5001|JADGKF010000001.1
SEQF5001_00948
Genome Viewer
NA
AA
567/189
60284-59718
RNA 2'%2C3'-cyclic phosphodiesterase
SEQF5001|JADGKF010000001.1
SEQF5001_00947
Genome Viewer
NA
AA
1128/376
59699-58572
hypothetical protein
SEQF5001|JADGKF010000001.1
SEQF5001_00946
Genome Viewer
NA
AA
1233/411
58433-57201
Mannose-1-phosphate guanylyltransferase 1
SEQF5001|JADGKF010000002.1
SEQF5001_01515
Genome Viewer
NA
AA
1731/577
58253-56523
hypothetical protein
SEQF5001|JADGKF010000001.1
SEQF5001_00945
Genome Viewer
NA
AA
300/100
56606-56905
hypothetical protein
SEQF5001|JADGKF010000002.1
SEQF5001_01514
Genome Viewer
NA
AA
321/107
56470-56150
Guanidinium exporter
SEQF5001|JADGKF010000001.1
SEQF5001_00944
Genome Viewer
NA
AA
711/237
56368-55658
hypothetical protein
SEQF5001|JADGKF010000003.1
SEQF5001_01817
Genome Viewer
NA
AA
423/141
56304-56726
hypothetical protein
SEQF5001|JADGKF010000003.1
SEQF5001_01816
Genome Viewer
NA
AA
924/308
56145-55222
Multidrug efflux system ATP-binding protein
SEQF5001|JADGKF010000002.1
SEQF5001_01513
Genome Viewer
NA
AA
630/210
56068-55439
Dephospho-CoA kinase
SEQF5001|JADGKF010000001.1
SEQF5001_00943
Genome Viewer
NA
AA
759/253
55658-54900
hypothetical protein
SEQF5001|JADGKF010000003.1
SEQF5001_01815
Genome Viewer
NA
AA
828/276
55225-54398
hypothetical protein
SEQF5001|JADGKF010000002.1
SEQF5001_01512
Genome Viewer
NA
AA
2097/699
55192-53096
UvrABC system protein B
SEQF5001|JADGKF010000001.1
SEQF5001_00942
Genome Viewer
NA
AA
1317/439
54903-53587
hypothetical protein
SEQF5001|JADGKF010000003.1
SEQF5001_01814
Genome Viewer
NA
AA
807/269
54388-53582
Linear gramicidin dehydrogenase LgrE
SEQF5001|JADGKF010000001.1
SEQF5001_00941
Genome Viewer
NA
AA
882/294
53590-52709
hypothetical protein
SEQF5001|JADGKF010000002.1
SEQF5001_01511
Genome Viewer
NA
AA
1470/490
52731-51262
Arginine/ornithine antiporter
SEQF5001|JADGKF010000001.1
SEQF5001_00940
Genome Viewer
NA
AA
924/308
52712-51789
hypothetical protein
SEQF5001|JADGKF010000003.1
SEQF5001_01813
Genome Viewer
NA
AA
1110/370
52454-53563
Alkanal monooxygenase alpha chain
SEQF5001|JADGKF010000001.1
SEQF5001_00939
Genome Viewer
NA
AA
210/70
51749-51540
hypothetical protein
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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